Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ompRTwo component transcriptional regulator; Signal transduction response regulator, receiver domain. (240 aa)    
Predicted Functional Partners:
envZ
Two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ.
 
 0.993
cckA
Sensory box histidine kinase/response regulator; ATPase-like, ATP-binding domain.
 
 0.943
AGA_1488
PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain.
  
 0.941
phoR
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
  
 0.874
ragB
Integral membrane sensor signal transduction histidine kinase.
  
  0.843
chvG
Two component sensor histidine kinase ChvG.
  
 0.825
marR
HTH transcriptional regulator, MarR.
       0.817
AGA_2329
Integral membrane sensor signal transduction histidine kinase; ATPase-like, ATP-binding domain.
  
  0.795
def-3
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.788
AGA_2111
RpsU-divergently transcribed protein.
       0.774
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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