Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGA_2124 | AGA_412 | AGA_2124 | AGA_412 | ATP12, ATPase F1F0-assembly protein. | Hypothetical protein; COG: Inactivated superfamily I helicase. | 0.478 |
| AGA_2124 | lolA | AGA_2124 | AGA_2128 | ATP12, ATPase F1F0-assembly protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.683 |
| AGA_2124 | rluC | AGA_2124 | AGA_2126 | ATP12, ATPase F1F0-assembly protein. | Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.816 |
| AGA_2124 | ycaJ | AGA_2124 | AGA_2127 | ATP12, ATPase F1F0-assembly protein. | Recombination factor protein RarA; ATPase, AAA-type, core. | 0.781 |
| AGA_409 | AGA_411 | AGA_409 | AGA_411 | ATP-dependent exoDNAse beta subunit. | Hypothetical protein; COG: RecB family exonuclease. | 0.911 |
| AGA_409 | AGA_412 | AGA_409 | AGA_412 | ATP-dependent exoDNAse beta subunit. | Hypothetical protein; COG: Inactivated superfamily I helicase. | 0.899 |
| AGA_409 | lolA | AGA_409 | AGA_2128 | ATP-dependent exoDNAse beta subunit. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.702 |
| AGA_411 | AGA_409 | AGA_411 | AGA_409 | Hypothetical protein; COG: RecB family exonuclease. | ATP-dependent exoDNAse beta subunit. | 0.911 |
| AGA_411 | AGA_412 | AGA_411 | AGA_412 | Hypothetical protein; COG: RecB family exonuclease. | Hypothetical protein; COG: Inactivated superfamily I helicase. | 0.988 |
| AGA_411 | lolA | AGA_411 | AGA_2128 | Hypothetical protein; COG: RecB family exonuclease. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.751 |
| AGA_412 | AGA_2124 | AGA_412 | AGA_2124 | Hypothetical protein; COG: Inactivated superfamily I helicase. | ATP12, ATPase F1F0-assembly protein. | 0.478 |
| AGA_412 | AGA_409 | AGA_412 | AGA_409 | Hypothetical protein; COG: Inactivated superfamily I helicase. | ATP-dependent exoDNAse beta subunit. | 0.899 |
| AGA_412 | AGA_411 | AGA_412 | AGA_411 | Hypothetical protein; COG: Inactivated superfamily I helicase. | Hypothetical protein; COG: RecB family exonuclease. | 0.988 |
| AGA_412 | lolA | AGA_412 | AGA_2128 | Hypothetical protein; COG: Inactivated superfamily I helicase. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.768 |
| aatB | lolA | AGA_1340 | AGA_2128 | ABC transporter ATP-binding protein. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.802 |
| aatB | lolC | AGA_1340 | AGA_2032 | ABC transporter ATP-binding protein. | Lipoprotein-releasing system permease protein; Protein of unknown function DUF214, permase predicted. | 0.979 |
| amiA | lolA | AGA_2350 | AGA_2128 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.836 |
| lolA | AGA_2124 | AGA_2128 | AGA_2124 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ATP12, ATPase F1F0-assembly protein. | 0.683 |
| lolA | AGA_409 | AGA_2128 | AGA_409 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ATP-dependent exoDNAse beta subunit. | 0.702 |
| lolA | AGA_411 | AGA_2128 | AGA_411 | Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Hypothetical protein; COG: RecB family exonuclease. | 0.751 |
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