STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_21446-phosphogluconate dehydrogenase, NAD-binding domain. (291 aa)    
Predicted Functional Partners:
AGA_987
enoyl-CoA hydratase.
 
 
 0.887
tkrA
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
 
  
 0.745
mmsA
Methylmalonate-semialdehyde dehydrogenase.
  
 
  0.739
ahpD
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
 
  0.694
AGA_837
Alcohol dehydrogenase, zinc-binding.
  
  
  0.680
ttuD
Hydroxypyruvate reductase.
    
 0.676
acoC
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); Alpha/beta hydrolase fold-1.
    
 0.648
acoC-2
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); Alpha/beta hydrolase fold-1.
    
 0.648
AGA_1869
acyl-CoA dehydrogenase type 2 domain protein.
  
 
 0.630
calB
Coniferyl-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.625
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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