Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA_2219HpnL: putative membrane protein. (336 aa)    
Predicted Functional Partners:
AGA_2218
Hypothetical protein; HpnN: hopanoid biosynthesis associated RND transporter like protein HpnN.
 
     0.842
dfrA
Dihydroflavonol-4-reductase.
 
     0.721
AGA_2536
Hopanoid biosynthesis associated radical SAM protein HpnJ.
  
     0.712
AGA_716
Hypothetical protein; Nucleoside phosphorylase.
 
     0.684
AGA_721
Glycosyl transferase family protein.
  
     0.642
AGA_2532
Radical SAM domain-containing protein.
  
     0.636
AGA_2534
Hypothetical protein; Toluene tolerance.
 
     0.633
AGA_2392
Hypothetical protein.
 
     0.616
ribH
Riboflavin synthase beta chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
       0.610
shc
Squalene-hopene cyclase.
 
     0.610
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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