STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copACu2+-exporting ATPase. (794 aa)    
Predicted Functional Partners:
AGA_2321
Hypothetical protein; Heavy metal transport/detoxification protein.
 
 
 0.986
copA-2
CopA family copper resistance protein.
  
  
 0.697
AGA_2280
Hypothetical protein predicted by Glimmer/Critica.
       0.535
adhB
Aldehyde dehydrogenase cytochrome c subunit; Cytochrome c, class I.
     
 0.526
csoR
Protein of unknown function DUF156.
 
  
 0.523
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 
      0.501
copB
Copper resistance B precursor.
     
 0.487
fieF
Cation diffusion facilitator family transporter; Cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
 
 0.455
ribD
[EC:3.5.4.26 1.1.1.193].
  
    0.454
sodC
Cu/Zn superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.444
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.