STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AGA_2314Hypothetical protein; COG: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (345 aa)    
Predicted Functional Partners:
AGA_1866
Binding-protein-dependent transport systems inner membrane component.
 
 0.907
AGA_1417
Binding-protein-dependent transport systems inner membrane component.
  
 0.897
AGA_1054
Nitrate ABC transporter, ATP-binding proteins C and D.
 
  0.875
AGA_1865
ABC transporter related.
  
  0.867
ssuD
Alkanesulfonate monooxygenase.
 
 
 0.847
ssuB
ABC transporter related.
 
  0.845
ssuA
Aliphatic sulfonate ABC transporter periplasmic ligand-binding protein.
  
  
  0.817
AGA_1863
Aliphatic sulfonate ABC transporter periplasmic substrate-binding protein.
  
  
  0.803
AGA_1053
Binding-protein-dependent transport systems inner membrane component.
 
 0.780
AGA_1416
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
  
  
  0.685
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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