STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
glpXFructose-1,6-bisphosphatase II; Fructose 1,6-bisphosphatase GlpX. (332 aa)    
Predicted Functional Partners:
tkt-2
Transketolase, N-terminal; Belongs to the transketolase family.
   
 0.942
tal
Glucose-6-phosphate isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
    
 0.936
tkt
Transketolase, N-terminal; Belongs to the transketolase family.
    
 0.887
manC
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
     
 0.883
fbaB
Fructose-bisphosphate aldolase, class I.
     
 0.869
recJ
recJ: single-stranded-DNA-specific exonuclease RecJ.
       0.773
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.729
hom
Homoserine dehydrogenase.
  
    0.674
aatC
Aminotransferase, class I/II; LL-diaminopimelate aminotransferase.
       0.672
pmi
Mannose-6-phosphate isomerase.
     
 0.608
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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