Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
btuCABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (234 aa)    
Predicted Functional Partners:
fecD
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
     0.994
yiuC
iron(III) dicitrate transporter ATP-binding protein FecE.
 
 0.986
hmuV
Iron complex transport system ATP-binding protein.
 
 0.916
AGA_942
Periplasmic binding protein.
 
 0.850
hmuU
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
     0.774
AGA_2611
Hypothetical protein predicted by Glimmer/Critica; ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
     0.774
hmuT
Iron complex transport system substrate-binding protein; Periplasmic binding protein.
 
 0.769
rluD
Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.504
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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