STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_242Hypothetical protein. (229 aa)    
Predicted Functional Partners:
AGA_954
Hypothetical protein.
  
     0.675
fusB-6
Fusaric acid resistance protein, conserved region.
  
     0.656
AGA_423
Hypothetical protein; COG: Type V secretory pathway, adhesin AidA.
  
     0.647
AGA_712
Protein of unknown function DUF1656.
  
     0.605
AGA_2508
Hypothetical protein.
  
     0.603
maf-4
Maf-like protein.
  
     0.599
AGA_1342
Hypothetical protein.
  
     0.592
AGA_1900
Hypothetical protein.
  
     0.583
AGA_1032
Hypothetical protein.
  
     0.582
AGA_290
Hypothetical protein.
  
     0.582
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.