STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_2427Secretory lipase. (416 aa)    
Predicted Functional Partners:
AGA_2428
Amidohydrolase 1.
       0.678
AGA_2429
N-acyl homoserine lactone hydrolase; Metallo-beta-lactamase family protein.
       0.678
AGA_2426
Glutamine synthetase.
       0.581
AGA_2425
Dioxygenase.
       0.566
tetR
TetR family transcriptional regulator.
  
     0.448
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.447
thcD
ferredoxin--NAD+ reductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.430
AGA_2424
Ferredoxin.
       0.430
ykfB
Muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
  0.423
AGA_473
Hypothetical protein; COG: DNA primase (bacterial type).
  
     0.412
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.