Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA_2447Hypothetical protein. (149 aa)    
Predicted Functional Partners:
gltS
[EC:1.4.7.1]; glutamate synthase (NADPH) large subunit (EC:1.4.1.13).
   
 
 0.929
gatA-2
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A; [EC:6.3.5.6 6.3.5.7].
 
    0.891
lpd
Dihydrolipoamide dehydrogenase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 0.880
pucG
Aminotransferase; Putative serine-pyruvate aminotransferase.
 
     0.866
sucA
Dehydrogenase, E1 component.
  
 0.861
amaB
N-carbamoyl-L-amino-acid hydrolase.
 
    0.826
fumA
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.815
gatA
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A; [EC:6.3.5.6 6.3.5.7].
 
    0.741
sdhB
Succinate dehydrogenase; Ferredoxin domain; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 0.737
acoC
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); Alpha/beta hydrolase fold-1.
  
 0.722
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
Server load: low (40%) [HD]