Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA_2495BFD domain protein (2Fe-2S)-binding domain protein. (78 aa)    
Predicted Functional Partners:
BFR
Bacterioferritin; Belongs to the bacterioferritin family.
  
 
 0.868
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
    
  0.769
thcD
ferredoxin--NAD+ reductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.695
AGA_500
Hypothetical protein; COG: FOG: WD40 repeat.
   
 
 0.553
gltS
[EC:1.4.7.1]; glutamate synthase (NADPH) large subunit (EC:1.4.1.13).
     
 0.509
ygiH
Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
     
  0.507
argH
Argininosuccinate lyase.
     
  0.507
mqoA
Malate dehydrogenase (quinone); Malate:quinone-oxidoreductase.
     
  0.507
copA-2
CopA family copper resistance protein.
     
  0.507
AGA_473
Hypothetical protein; COG: DNA primase (bacterial type).
     
  0.507
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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