STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
budAAlpha-acetolactate decarboxylase. (152 aa)    
Predicted Functional Partners:
budA-2
Alpha-acetolactate decarboxylase.
     0.994
alsS
Acetolactate synthase I/II/III large subunit; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Belongs to the TPP enzyme family.
 
 
 0.974
AGA_2545
Benzoylformate decarboxylase; Thiamine pyrophosphate protein TPP binding domain protein; Belongs to the TPP enzyme family.
 
 
 0.784
ilvI
Acetolactate synthase I/II/III large subunit; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain.
   
 
 0.780
ilvH
Acetolactate synthase, small subunit, C-terminal.
     
 0.655
AGA_212
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
  0.624
budR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.537
AGA_2363
Short-chain dehydrogenase/reductase SDR.
     
  0.466
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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