Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
AGA_2572Protein of unknown function DUF1643. (193 aa)    
Predicted Functional Partners:
AGA_2570
Hypothetical protein.
       0.645
ampS
Aminopeptidase.
       0.645
nodL
Maltose O-acetyltransferase.
       0.543
AGA_1607
Hypothetical protein.
  
     0.452
AGA_2569
Hypothetical protein predicted by Glimmer/Critica.
       0.437
AGA_2189
Hypothetical protein; Peptidase aspartic, eukaryotic predicted.
  
     0.420
AGA_2475
Hypothetical protein.
  
     0.411
AGA_656
Hypothetical protein.
  
     0.406
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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