STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AGA_2594UspA domain-containing protein. (272 aa)    
Predicted Functional Partners:
crcB
CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
     
 0.795
uspA-2
Universal stress protein.
  
     0.713
cycB
Cytochrome c class I.
  
     0.521
mauB
Methylamine dehydrogenase heavy chain.
  
     0.503
ogt
Methylated-DNA-[protein]-cysteine S-methyltransferase.
   
    0.445
mauE
Putative methylamine utilization protein MauE.
  
     0.428
AGA_1303
Import inner membrane translocase, subunit Tim44.
  
     0.421
AGA_2145
Phytoene synthase.
  
     0.421
AGA_374
Hypothetical protein.
  
     0.420
AGA_242
Hypothetical protein.
  
     0.401
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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