Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
AGA_2611Hypothetical protein predicted by Glimmer/Critica; ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (145 aa)    
Predicted Functional Partners:
hmuU
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
     0.991
hmuV
Iron complex transport system ATP-binding protein.
 
 0.986
hmuT
Iron complex transport system substrate-binding protein; Periplasmic binding protein.
 
 0.969
yiuC
iron(III) dicitrate transporter ATP-binding protein FecE.
 
 0.880
AGA_942
Periplasmic binding protein.
 
 0.831
btuC
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
     0.774
fecD
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
     0.774
AGA_2613
Hypothetical protein; Antibiotic biosynthesis monooxygenase.
       0.773
AGA_2608
Hypothetical protein; Antibiotic biosynthesis monooxygenase.
       0.701
AGA_2614
Alpha/beta hydrolase fold-1.
       0.488
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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