STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_368Recombinase; Resolvase, N-terminal. (465 aa)    
Predicted Functional Partners:
AGA_883
Burkholderia phage Bcep781 gp07; PHAST result (e-value 9e-09).
   
    0.749
AGA_366
Protein of unknown function DUF2136.
 
     0.737
AGA_367
Hypothetical protein; Helix-turn-helix type 3.
 
     0.723
AGA_364
Hypothetical protein.
 
     0.558
AGA_363
DNA methylase N-4/N-6; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.536
AGA_365
Hypothetical protein.
       0.467
fabI
Enoyl-(acyl-carrier-protein) reductase.
      
 0.400
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.