STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_374Hypothetical protein. (225 aa)    
Predicted Functional Partners:
AGA_2145
Phytoene synthase.
  
     0.718
oprO
Porin O/P polyphosphate-selective.
  
     0.646
mauB
Methylamine dehydrogenase heavy chain.
  
     0.624
mauE
Putative methylamine utilization protein MauE.
  
     0.619
maf-4
Maf-like protein.
  
     0.614
AGA_177
Hypothetical protein; O-antigen ligase-related.
  
     0.603
AGA_1662
Hypothetical protein; ABC-type glycine betaine transport system, substrate-binding domain.
  
     0.593
oprO-2
Phosphate-selective porin O/P.
  
     0.569
AGA_1367
COG: Predicted membrane protein.
  
     0.567
AGA_755
NADH:ubiquinone oxidoreductase 17.2 kD subunit.
  
     0.558
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.