STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifS-2Cysteine desulfurase I NifS. (230 aa)    
Predicted Functional Partners:
nifS
Cysteine desulfurase I NifS.
     0.994
nifU
NifU-like domain-containing protein.
  
 0.993
fxdB
Ferredoxin.
 0.965
yrkI
SirA family protein; Belongs to the sulfur carrier protein TusA family.
   
 0.962
iscS
Cysteine desulfurase.
 
  
 
0.932
AGA_820
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
   
 0.874
AGA_1861
Rhodanese domain-containing protein; Rhodanese-like.
   
 0.845
hesB
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
  
 0.816
moeB
UBA/ThiF-type NAD/FAD binding protein.
   
 0.780
AGA_2424
Ferredoxin.
  
 0.771
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.