STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBTolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (454 aa)    
Predicted Functional Partners:
omp
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 0.976
tolQ
Biopolymer transport protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
 0.931
AGA_420
tol_pal_ybgF: tol-pal system protein YbgF.
 
  
 0.927
AGA_423
Hypothetical protein; COG: Type V secretory pathway, adhesin AidA.
   
 
 0.876
tolR
Biopolymer transport protein ExbD/TolR.
 
  
 0.871
ccp
Cytochrome c peroxidase.
   
   0.846
AGA_500
Hypothetical protein; COG: FOG: WD40 repeat.
   
   0.845
ompA
Outer membrane protein.
  
 0.810
ompA-2
Outer membrane protein, OmpA/MotB, C-terminal.
  
 0.810
ompA-3
Outer membrane protein.
  
 0.810
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.