STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
adhPAlcohol dehydrogenase, zinc-binding. (342 aa)    
Predicted Functional Partners:
frmA
Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.936
adh
Alcohol dehydrogenase.
  
  
 
0.899
pdc
Pyruvate decarboxylase; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain.
   
 
 0.891
adhA
PQQ-dependent alcohol dehydrogenase.
   
 
 0.882
AGA_579
PQQ-dependent alcohol dehydrogenase cytochrome c subunit precursor.
   
 
  0.876
AGA_696
Putative L-amino-acid oxidase precursor.
     
  0.813
attK-3
Succinate-semialdehyde dehydrogenase (NADP+).
  
  0.774
leuC
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
    
   0.673
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.655
adhB
Aldehyde dehydrogenase cytochrome c subunit; Cytochrome c, class I.
   
 
  0.636
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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