STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhPAlcohol dehydrogenase, zinc-binding. (342 aa)    
Predicted Functional Partners:
frmA
Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
0.935
adh
Alcohol dehydrogenase.
  
  
 
0.901
pdc
Pyruvate decarboxylase; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain.
 
 
 
 0.892
adhA
PQQ-dependent alcohol dehydrogenase.
   
 
 0.888
AGA_579
PQQ-dependent alcohol dehydrogenase cytochrome c subunit precursor.
   
 
  0.877
attK-3
Succinate-semialdehyde dehydrogenase (NADP+).
 
 
 0.797
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.670
AGA_1037
Gluconate 2-dehydrogenase (acceptor); Cytochrome c, class I.
   
 
  0.655
aldB
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
 
 
 
  0.649
adhB
Aldehyde dehydrogenase cytochrome c subunit; Cytochrome c, class I.
   
 
  0.648
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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