STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AGA_579PQQ-dependent alcohol dehydrogenase cytochrome c subunit precursor. (320 aa)    
Predicted Functional Partners:
adhA
PQQ-dependent alcohol dehydrogenase.
   
  0.971
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.905
adh
Alcohol dehydrogenase.
   
 
  0.876
adhP
Alcohol dehydrogenase, zinc-binding.
   
 
  0.876
cyaC
Cytochrome o ubiquinol oxidase subunit III.
  
 0.874
frmA
Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.869
pdc
Pyruvate decarboxylase; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain.
     
  0.868
AGA_1038
[EC:1.1.99.3]; gluconate 2-dehydrogenase (acceptor) (EC:1.1.99.3), FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
   0.843
AGA_2480
Cytochrome c, class I.
  
 
0.808
petB
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
  0.792
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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