STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
adhAPQQ-dependent alcohol dehydrogenase. (743 aa)    
Predicted Functional Partners:
AGA_579
PQQ-dependent alcohol dehydrogenase cytochrome c subunit precursor.
   
  0.971
adhB
Aldehyde dehydrogenase cytochrome c subunit; Cytochrome c, class I.
  
 0.950
tal
Glucose-6-phosphate isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
   
 
 0.930
AGA_1037
Gluconate 2-dehydrogenase (acceptor); Cytochrome c, class I.
   
  0.908
frmA
Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.906
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.906
cyaC
Cytochrome o ubiquinol oxidase subunit III.
  
 0.889
adh
Alcohol dehydrogenase.
   
 
 0.886
pdc
Pyruvate decarboxylase; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain.
     
 0.883
adhP
Alcohol dehydrogenase, zinc-binding.
   
 
 0.882
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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