STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adhAPQQ-dependent alcohol dehydrogenase. (743 aa)    
Predicted Functional Partners:
AGA_2480
Cytochrome c, class I.
   
 0.951
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.944
AGA_1670
Hypothetical protein; Putative cytochrome c, class I.
   
 0.939
cyaC
Cytochrome o ubiquinol oxidase subunit III.
  
 0.930
frmA
Alcohol dehydrogenase, zinc-binding; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
     
 0.918
nodQ
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate.
     
 0.917
cyaA
Cytochrome o ubiquinol oxidase subunit II.
  
 0.914
AGA_500
Hypothetical protein; COG: FOG: WD40 repeat.
 
 0.908
mauB
Methylamine dehydrogenase heavy chain.
 
 0.899
adh
Alcohol dehydrogenase.
   
 
 0.893
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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