STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepA-2Leucyl aminopeptidase; Peptidase M17; Belongs to the peptidase M17 family. (474 aa)    
Predicted Functional Partners:
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
  
 
0.894
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
   
 
 0.892
cysK
Cysteine synthase A.
    
 0.882
cysB
Cysteine synthase A.
    
 0.882
aatA-2
Aspartate aminotransferase.
    
  0.880
aatA-3
[EC:2.6.1.1]; aminotransferase class I and II.
    
  0.880
ggt-3
Gamma-glutamyltranspeptidase.
     
 0.871
ggt1
Gamma-glutamyltranspeptidase.
     
 0.871
aatA
Aspartate aminotransferase.
    
  0.664
glyA
Glycine hydroxymethyltransferase.
     
 0.652
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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