Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGA_1020 | AGA_1061 | AGA_1020 | AGA_1061 | TonB-dependent siderophore receptor. | Hypothetical protein; COG: Signal peptidase I. | 0.576 |
AGA_1020 | AGA_1107 | AGA_1020 | AGA_1107 | TonB-dependent siderophore receptor. | Hypothetical protein. | 0.405 |
AGA_1020 | AGA_1904 | AGA_1020 | AGA_1904 | TonB-dependent siderophore receptor. | Protein of unknown function DUF1597. | 0.608 |
AGA_1020 | AGA_1967 | AGA_1020 | AGA_1967 | TonB-dependent siderophore receptor. | Hypothetical protein; COG: Predicted peptidase. | 0.666 |
AGA_1020 | AGA_2228 | AGA_1020 | AGA_2228 | TonB-dependent siderophore receptor. | Protein of unknown function DUF1597. | 0.609 |
AGA_1020 | AGA_2511 | AGA_1020 | AGA_2511 | TonB-dependent siderophore receptor. | TonB-dependent receptor, beta-barrel. | 0.483 |
AGA_1020 | AGA_290 | AGA_1020 | AGA_290 | TonB-dependent siderophore receptor. | Hypothetical protein. | 0.751 |
AGA_1020 | AGA_656 | AGA_1020 | AGA_656 | TonB-dependent siderophore receptor. | Hypothetical protein. | 0.751 |
AGA_1020 | oprB-3 | AGA_1020 | AGA_2204 | TonB-dependent siderophore receptor. | Porin; Carbohydrate-selective porin OprB. | 0.563 |
AGA_1061 | AGA_1020 | AGA_1061 | AGA_1020 | Hypothetical protein; COG: Signal peptidase I. | TonB-dependent siderophore receptor. | 0.576 |
AGA_1061 | AGA_1107 | AGA_1061 | AGA_1107 | Hypothetical protein; COG: Signal peptidase I. | Hypothetical protein. | 0.769 |
AGA_1061 | AGA_2511 | AGA_1061 | AGA_2511 | Hypothetical protein; COG: Signal peptidase I. | TonB-dependent receptor, beta-barrel. | 0.707 |
AGA_1061 | AGA_290 | AGA_1061 | AGA_290 | Hypothetical protein; COG: Signal peptidase I. | Hypothetical protein. | 0.517 |
AGA_1061 | AGA_656 | AGA_1061 | AGA_656 | Hypothetical protein; COG: Signal peptidase I. | Hypothetical protein. | 0.739 |
AGA_1107 | AGA_1020 | AGA_1107 | AGA_1020 | Hypothetical protein. | TonB-dependent siderophore receptor. | 0.405 |
AGA_1107 | AGA_1061 | AGA_1107 | AGA_1061 | Hypothetical protein. | Hypothetical protein; COG: Signal peptidase I. | 0.769 |
AGA_1107 | AGA_1904 | AGA_1107 | AGA_1904 | Hypothetical protein. | Protein of unknown function DUF1597. | 0.768 |
AGA_1107 | AGA_2228 | AGA_1107 | AGA_2228 | Hypothetical protein. | Protein of unknown function DUF1597. | 0.503 |
AGA_1107 | AGA_2511 | AGA_1107 | AGA_2511 | Hypothetical protein. | TonB-dependent receptor, beta-barrel. | 0.556 |
AGA_1107 | AGA_656 | AGA_1107 | AGA_656 | Hypothetical protein. | Hypothetical protein. | 0.749 |
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