STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_707Extracellular solute-binding protein. (369 aa)    
Predicted Functional Partners:
AGA_708
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.995
AGA_705
Uncharacterised protein family UPF0153; Belongs to the UPF0260 family.
       0.796
AGA_704
Protein of unknown function DUF45.
       0.787
AGA_706
Spermidine/putrescine transporter permease protein.
       0.773
cysA
Sulfate transport system ATP-binding protein.
    
  0.527
AGA_703
Integrase family protein; Integrase, catalytic core, phage; Belongs to the 'phage' integrase family.
 
     0.498
cysT
Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 
  0.489
AGA_709
Hypothetical protein.
       0.478
AGA_1949
Polar amino acid transport system substrate-binding protein; Extracellular solute-binding protein, family 3.
      
 0.420
AGA_285
Polar amino acid transport system substrate-binding protein.
      
 0.420
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.