STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oxyRLysR family transcriptional regulator; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
budR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.740
lysR-11
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.662
ahpC
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
 
   
 0.660
nac
Transcriptional regulator, LysR family; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.632
lysR-7
Transcriptional regulator, LysR family; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.627
yneJ
Transcriptional regulator; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.617
lysR-9
Transcriptional regulator, LysR family; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.610
AGA_1853
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.592
AGA_2013
Transcriptional regulator, LysR family; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
  
     0.562
ahpD-2
Alkyl hydroperoxide reductase subunit D; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.558
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.