STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpCPeroxiredoxin (alkyl hydroperoxide reductase subunit C). (180 aa)    
Predicted Functional Partners:
ahpD-2
Alkyl hydroperoxide reductase subunit D; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
  
 0.927
trxB-2
Thioredoxin reductase (NADPH).
  
 
 0.907
trxB
Thioredoxin reductase (NADPH).
  
 
 0.896
ccmG
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
  
 0.866
AGA_2490
Methylamine dehydrogenase accessory protein MauD.
  
 0.866
mauD
Hypothetical protein; MauD: methylamine dehydrogenase accessory protein MauD.
   
 0.863
fur
Fur family transcriptional regulator, ferric uptake regulator; Ferric-uptake regulator; Belongs to the Fur family.
  
  
 0.834
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 
 0.795
tal
Glucose-6-phosphate isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.751
oxyR
LysR family transcriptional regulator; LysR, substrate-binding; Belongs to the LysR transcriptional regulatory family.
 
   
 0.660
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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