STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
djlAHeat shock protein DnaJ, N-terminal. (289 aa)    
Predicted Functional Partners:
nifU
NifU-like domain-containing protein.
  
 0.986
dnaK-2
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.918
dnaK
HSP70 family molecular chaperone.
  
 0.903
iscS
Cysteine desulfurase.
  
 0.679
nifS
Cysteine desulfurase I NifS.
  
 0.679
nifS-2
Cysteine desulfurase I NifS.
  
 0.679
hesB
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 
 0.669
hesB-2
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 
 0.669
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
 
     0.665
AGA_737
Toluene tolerance.
 
     0.637
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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