STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_755NADH:ubiquinone oxidoreductase 17.2 kD subunit. (126 aa)    
Predicted Functional Partners:
AGA_756
Hypothetical protein; Mammalian cell entry related.
       0.702
AGA_758
Protein of unknown function DUF2155.
 
     0.691
AGA_2163
ETC complex I subunit conserved region.
  
    0.638
AGA_757
Hypothetical protein.
       0.610
AGA_1303
Import inner membrane translocase, subunit Tim44.
  
     0.572
ctaA
Cytochrome oxidase assembly; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.
  
     0.564
AGA_374
Hypothetical protein.
  
     0.558
AGA_251
COG: Uncharacterized protein conserved in bacteria.
  
   
 0.545
nrdJ
Ribonucleoside-diphosphate reductase alpha chain.
       0.532
yjgF-2
Endoribonuclease L-PSP.
       0.529
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.