STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
otsBTrehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (247 aa)    
Predicted Functional Partners:
otsA
Alpha,alpha-trehalose-phosphate synthase (UDP-forming).
 
 
 0.999
tal
Glucose-6-phosphate isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.758
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.686
AGA_761
Disulfide bond formation protein B.
     
 0.635
AGA_757
Hypothetical protein.
  
    0.564
AGA_758
Protein of unknown function DUF2155.
       0.557
fbaB
Fructose-bisphosphate aldolase, class I.
   
    0.556
AGA_1221
Aldo/keto reductase.
   
    0.555
dkgB
2,5-diketo-D-gluconate reductase.
   
    0.555
AGA_1079
Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
   
    0.544
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.