STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_820Hypothetical protein; Belongs to the sulfur carrier protein TusA family. (92 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase.
   
 0.874
nifS
Cysteine desulfurase I NifS.
   
 0.874
nifS-2
Cysteine desulfurase I NifS.
   
 0.874
AGA_1861
Rhodanese domain-containing protein; Rhodanese-like.
  
 
 0.851
nodQ
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate.
  
  
 0.637
fur
Fur family transcriptional regulator, ferric uptake regulator; Ferric-uptake regulator; Belongs to the Fur family.
       0.633
moeB
UBA/ThiF-type NAD/FAD binding protein.
 
  
 0.583
AGA_1112
Hypothetical protein.
 
 
 0.557
AGA_2622
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Xanthine dehydrogenase accessory protein pucB.
     
 0.537
AGA_120
Nitronate monooxygenase; Putative 2-nitropropane dioxygenase (EC:1.13.11.32).
  
 
  0.490
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.