STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_875Hypothetical protein. (144 aa)    
Predicted Functional Partners:
AGA_876
Phage terminase, large subunit, PBSX family.
 
     0.869
AGA_886
Burkholderia phage Bcep781 gp04; PHAST result (e-value 9e-53).
  
     0.666
AGA_896
Burkholderia phage Bcep781 gp36; PHAST result (e-value 7e-18).
  
     0.650
AGA_76
Hypothetical protein.
  
     0.643
AGA_900
Burkholderia phage Bcep781 gp32; PHAST result (e-value 3e-28).
  
     0.639
AGA_94
Burkholderia phage Bcep781 gp14; PHAST result (e-value 3e-40).
  
     0.636
AGA_878
Burkholderia phage Bcep781 gp14; PHAST result (e-value 2e-37).
  
     0.621
AGA_899
Burkholderia phage Bcep781 gp33; PHAST result (e-value 3e-61).
  
     0.576
AGA_874
Hypothetical protein.
       0.572
AGA_877
Burkholderia phage Bcep781 gp16; PHAST result (e-value 4e-37).
 
     0.557
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.