STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGA_878Burkholderia phage Bcep781 gp14; PHAST result (e-value 2e-37). (402 aa)    
Predicted Functional Partners:
AGA_877
Burkholderia phage Bcep781 gp16; PHAST result (e-value 4e-37).
 
   
 0.949
AGA_886
Burkholderia phage Bcep781 gp04; PHAST result (e-value 9e-53).
 
     0.934
AGA_879
Phage structural protein; PHAST result (e-value 1e-19).
 
     0.923
AGA_76
Hypothetical protein.
  
     0.774
AGA_77
Hypothetical protein; COG: Uncharacterized homolog of phage Mu protein gp47.
  
     0.774
AGA_896
Burkholderia phage Bcep781 gp36; PHAST result (e-value 7e-18).
  
     0.774
AGA_899
Burkholderia phage Bcep781 gp33; PHAST result (e-value 3e-61).
  
     0.774
AGA_900
Burkholderia phage Bcep781 gp32; PHAST result (e-value 3e-28).
  
     0.774
AGA_883
Burkholderia phage Bcep781 gp07; PHAST result (e-value 9e-09).
       0.730
AGA_880
Burkholderia phage Bcep781 gp12; PHAST result (e-value 6e-62).
       0.725
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.