STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_901Burkholderia phage Bcep781 gp31; PHAST result (e-value 2e-11). (299 aa)    
Predicted Functional Partners:
ftsK
Cell divisionFtsK/SpoIIIE.
    
   0.843
AGA_899
Burkholderia phage Bcep781 gp33; PHAST result (e-value 3e-61).
   
   0.835
AGA_1006
TonB-dependent receptor, beta-barrel.
    
 
 0.817
AGA_898
Burkholderia phage Bcep781 gp51; PHAST result (e-value 7e-08).
       0.773
AGA_900
Burkholderia phage Bcep781 gp32; PHAST result (e-value 3e-28).
       0.773
AGA_902
Hypothetical protein predicted by Glimmer/Critica.
       0.773
AGA_903
Hypothetical protein.
       0.580
AGA_2188
Hypothetical protein.
   
 0.486
AGA_1488
PAS/PAC sensor hybrid histidine kinase; ATPase-like, ATP-binding domain.
   
 
 0.442
AGA_1095
Putative endopeptidase.
   
    0.408
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.