Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGA_919Beta-lactamase domain protein. (308 aa)    
Predicted Functional Partners:
AGA_1861
Rhodanese domain-containing protein; Rhodanese-like.
  
 0.929
AGA_918
Protein of unknown function DUF81.
 
   
 0.823
arsR-2
HTH transcriptional regulator, ArsR.
 
   
 0.750
AGA_1357
COG: Uncharacterized protein conserved in bacteria.
 
     0.707
AGA_920
Peroxiredoxin (alkyl hydroperoxide reductase subunit C).
 
    0.677
AGA_2214
Hypothetical protein; Putative oxidoreductase (EC:1.1.1.-).
 
 
 0.655
AGA_2619
Beta-lactamase domain protein.
  
  
  0.564
tag
DNA-3-methyladenine glycosylase I.
       0.539
tkrA
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
   
 
  0.417
tal
Glucose-6-phosphate isomerase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.412
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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