STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA_984Putative cation ABC transporter, permease protein; ABC-3. (264 aa)    
Predicted Functional Partners:
znuC
Putative cation ABC transporter, ATP-binding protein.
 
 0.999
znuA
ABC transporter metal-binding lipoprotein.
 
 
 0.997
np20
Fur family transcriptional regulator, zinc uptake regulator; Belongs to the Fur family.
 
  
 0.780
mntH
Manganese transport protein; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
   
  
 0.661
AGA_1949
Polar amino acid transport system substrate-binding protein; Extracellular solute-binding protein, family 3.
     
 0.589
AGA_285
Polar amino acid transport system substrate-binding protein.
     
 0.589
AGA_979
Hypothetical protein.
       0.536
AGA_978
L-asparaginase II.
       0.483
AGA_1662
Hypothetical protein; ABC-type glycine betaine transport system, substrate-binding domain.
  
  
  0.437
AGA_1183
Lipopolysaccharide export system ATP-binding protein.
     
 0.432
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.