STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rutFPutative flavin reductase RutF. (164 aa)    
Predicted Functional Partners:
RutE
[EC:1.-.-.-]; NADH dehydrogenase, Nitroreductase-like.
  
 
 0.849
AGA_998
cob(II)yrinic acid a,c-diamide reductase.
   
 
 0.806
ribF
Riboflavin kinase / FMN adenylyltransferase; Riboflavin kinase RibF; Belongs to the ribF family.
    
  0.787
ssuD
Alkanesulfonate monooxygenase.
 
 
 0.787
AGA_1869
acyl-CoA dehydrogenase type 2 domain protein.
 
  
 0.637
AGA_985
Hypothetical protein predicted by Glimmer/Critica.
       0.623
AGA_100
Putative DNA replication protein; PHAST result (e-value 8e-25).
     
  0.619
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
  
 0.591
AGA_1211
Adenosylcobalamin-dependent diol dehydratase gamma subunit; Belongs to the Cob(I)alamin adenosyltransferase family.
     
  0.581
cobT-2
Cobaltochelatase CobT.
     
  0.581
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.