STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fusB-7Fusaric acid resistance protein, conserved region. (755 aa)    
Predicted Functional Partners:
marR-4
HTH transcriptional regulator, MarR.
 
     0.857
AGA_713
HlyD family secretion protein.
 
    0.746
AGA_228
Hypothetical protein.
  
     0.710
AGA_2210
Putative efflux pump component; Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.663
AGA_1020
TonB-dependent siderophore receptor.
  
     0.641
oprO
Porin O/P polyphosphate-selective.
  
     0.628
AGA_2558
COG: Predicted integral membrane protein.
  
     0.610
oprO-2
Phosphate-selective porin O/P.
  
     0.609
AGA_1073
Putative TonB-dependent receptor.
  
     0.584
mauB
Methylamine dehydrogenase heavy chain.
  
     0.579
Your Current Organism:
Acetobacter ghanensis
NCBI taxonomy Id: 431306
Other names: A. ghanensis, Acetobacter ghanensis Cleenwerck et al. 2007, Acetobacter sp. 384, Acetobacter sp. 444B, DSM 18895, LMG 23848, LMG:23848, strain 430A, strain R-29337
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.