STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975075_01806Unannotated protein. (104 aa)    
Predicted Functional Partners:
GCA_000975075_01804
Unannotated protein.
       0.772
GCA_000975075_01805
Unannotated protein.
       0.772
GCA_000975075_00638
Unannotated protein.
  
     0.768
GCA_000975075_02378
Unannotated protein.
  
     0.710
GCA_000975075_01488
Unannotated protein.
  
     0.701
GCA_000975075_00344
Unannotated protein.
  
     0.694
GCA_000975075_01807
Unannotated protein.
 
     0.656
GCA_000975075_02129
Unannotated protein.
  
     0.656
GCA_000975075_01802
Unannotated protein.
 
    0.650
GCA_000975075_02300
Unannotated protein.
  
     0.607
Your Current Organism:
Demequina lutea
NCBI taxonomy Id: 431489
Other names: Cellulomonas sp. RODSPM19, Cellulomonas sp. RODXS3, D. lutea, DSM 19970, Demequina lutea Finster et al. 2009, JCM 17019, LMG 24795, LMG:24795, strain RODXS3, strain SV45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.