STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975075_02304Unannotated protein. (1171 aa)    
Predicted Functional Partners:
GCA_000975075_01437
Unannotated protein.
   
 0.999
GCA_000975075_01976
Unannotated protein.
  
 
 
 0.998
GCA_000975075_01975
Unannotated protein.
  
 
 
 0.995
GCA_000975075_01449
Unannotated protein.
  
 
 0.957
GCA_000975075_01937
Unannotated protein.
 
 
 
 0.955
GCA_000975075_00453
Unannotated protein.
   
 
 0.948
GCA_000975075_00752
Unannotated protein.
 
  
 0.919
GCA_000975075_01156
Unannotated protein.
  
  
 0.894
GCA_000975075_02303
Unannotated protein.
       0.862
GCA_000975075_00190
Unannotated protein.
  
  
 0.716
Your Current Organism:
Demequina lutea
NCBI taxonomy Id: 431489
Other names: Cellulomonas sp. RODSPM19, Cellulomonas sp. RODXS3, D. lutea, DSM 19970, Demequina lutea Finster et al. 2009, JCM 17019, LMG 24795, LMG:24795, strain RODXS3, strain SV45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.