STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000975075_02533Unannotated protein. (244 aa)    
Predicted Functional Partners:
GCA_000975075_02535
Unannotated protein.
       0.827
GCA_000975075_02534
Unannotated protein.
       0.801
GCA_000975075_02536
Unannotated protein.
       0.623
GCA_000975075_02538
Unannotated protein.
       0.605
GCA_000975075_02532
Unannotated protein.
       0.593
GCA_000975075_02539
Unannotated protein.
       0.570
GCA_000975075_02537
Unannotated protein.
       0.482
GCA_000975075_02531
Unannotated protein.
       0.414
GCA_000975075_02541
Unannotated protein.
       0.412
GCA_000975075_02540
Unannotated protein.
       0.403
Your Current Organism:
Demequina lutea
NCBI taxonomy Id: 431489
Other names: Cellulomonas sp. RODSPM19, Cellulomonas sp. RODXS3, D. lutea, DSM 19970, Demequina lutea Finster et al. 2009, JCM 17019, LMG 24795, LMG:24795, strain RODXS3, strain SV45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.