Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AND_000018 | AND_000661 | W5JWQ3 | W5JTR7 | Histone H2A; Belongs to the histone H2A family. | Leucine-rich repeat kinase. | 0.666 |
AND_000018 | AND_001738 | W5JWQ3 | W5JUP8 | Histone H2A; Belongs to the histone H2A family. | Uncharacterized protein. | 0.713 |
AND_000018 | AND_001856 | W5JWQ3 | W5JH29 | Histone H2A; Belongs to the histone H2A family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.994 |
AND_000018 | AND_003820 | W5JWQ3 | W5JNI4 | Histone H2A; Belongs to the histone H2A family. | Uncharacterized protein. | 0.870 |
AND_000018 | AND_004927 | W5JWQ3 | W5JJ87 | Histone H2A; Belongs to the histone H2A family. | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.596 |
AND_000018 | AND_006366 | W5JWQ3 | W5JGP1 | Histone H2A; Belongs to the histone H2A family. | Histone H2B; Belongs to the histone H2B family. | 0.996 |
AND_000041 | AND_000661 | W5JWN7 | W5JTR7 | Rab5 GDP/GTP exchange factor. | Leucine-rich repeat kinase. | 0.847 |
AND_000041 | AND_001738 | W5JWN7 | W5JUP8 | Rab5 GDP/GTP exchange factor. | Uncharacterized protein. | 0.692 |
AND_000041 | AND_003820 | W5JWN7 | W5JNI4 | Rab5 GDP/GTP exchange factor. | Uncharacterized protein. | 0.999 |
AND_000661 | AND_000018 | W5JTR7 | W5JWQ3 | Leucine-rich repeat kinase. | Histone H2A; Belongs to the histone H2A family. | 0.666 |
AND_000661 | AND_000041 | W5JTR7 | W5JWN7 | Leucine-rich repeat kinase. | Rab5 GDP/GTP exchange factor. | 0.847 |
AND_000661 | AND_001738 | W5JTR7 | W5JUP8 | Leucine-rich repeat kinase. | Uncharacterized protein. | 0.660 |
AND_000661 | AND_001856 | W5JTR7 | W5JH29 | Leucine-rich repeat kinase. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.716 |
AND_000661 | AND_003820 | W5JTR7 | W5JNI4 | Leucine-rich repeat kinase. | Uncharacterized protein. | 0.997 |
AND_000661 | AND_004927 | W5JTR7 | W5JJ87 | Leucine-rich repeat kinase. | GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. | 0.503 |
AND_000661 | AND_006363 | W5JTR7 | W5JF56 | Leucine-rich repeat kinase. | Histone H2A; Belongs to the histone H2A family. | 0.666 |
AND_000661 | AND_006366 | W5JTR7 | W5JGP1 | Leucine-rich repeat kinase. | Histone H2B; Belongs to the histone H2B family. | 0.656 |
AND_000661 | ND4 | W5JTR7 | D8VEL6 | Leucine-rich repeat kinase. | NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.838 |
AND_001134 | AND_001738 | W5JVY3 | W5JUP8 | DPH3. | Uncharacterized protein. | 0.668 |
AND_001738 | AND_000018 | W5JUP8 | W5JWQ3 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.713 |
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