K3WFF5_GLOUD protein (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K3WFF5_GLOUD

Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (342 aa)

Predicted Functional Partners:

K3XCB8_GLOUD

0.813

K3WEA8_GLOUD

0.811

K3WFP3_GLOUD

0.618

K3X8K7_GLOUD

0.613

K3WRT4_GLOUD

0.603

K3W6U8_GLOUD

0.600

K3X317_GLOUD

0.592

K3X5U7_GLOUD

0.581

K3W6R6_GLOUD

0.579

K3W5L1_GLOUD

0.578

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3W5L1_GLOUD	K3W6R6_GLOUD	K3W5L1	K3W6R6	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.999
K3W5L1_GLOUD	K3W6U8_GLOUD	K3W5L1	K3W6U8	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein.	0.998
K3W5L1_GLOUD	K3WEA8_GLOUD	K3W5L1	K3WEA8	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_L18e/L15P domain-containing protein.	0.998
K3W5L1_GLOUD	K3WFF5_GLOUD	K3W5L1	K3WFF5	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.578
K3W5L1_GLOUD	K3WFP3_GLOUD	K3W5L1	K3WFP3	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_L14e domain-containing protein.	0.998
K3W5L1_GLOUD	K3WRT4_GLOUD	K3W5L1	K3WRT4	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.998
K3W5L1_GLOUD	K3X317_GLOUD	K3W5L1	K3X317	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
K3W5L1_GLOUD	K3X5U7_GLOUD	K3W5L1	K3X5U7	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_L2_C domain-containing protein.	0.998
K3W5L1_GLOUD	K3X8K7_GLOUD	K3W5L1	K3X8K7	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	Ribosomal_L28e domain-containing protein.	0.998
K3W5L1_GLOUD	K3XCB8_GLOUD	K3W5L1	K3XCB8	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
K3W6R6_GLOUD	K3W5L1_GLOUD	K3W6R6	K3W5L1	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.999
K3W6R6_GLOUD	K3W6U8_GLOUD	K3W6R6	K3W6U8	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein.	0.998
K3W6R6_GLOUD	K3WEA8_GLOUD	K3W6R6	K3WEA8	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Ribosomal_L18e/L15P domain-containing protein.	0.998
K3W6R6_GLOUD	K3WFF5_GLOUD	K3W6R6	K3WFF5	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.579
K3W6R6_GLOUD	K3WFP3_GLOUD	K3W6R6	K3WFP3	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Ribosomal_L14e domain-containing protein.	0.998
K3W6R6_GLOUD	K3WRT4_GLOUD	K3W6R6	K3WRT4	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.	0.998
K3W6R6_GLOUD	K3X317_GLOUD	K3W6R6	K3X317	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
K3W6R6_GLOUD	K3X5U7_GLOUD	K3W6R6	K3X5U7	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Ribosomal_L2_C domain-containing protein.	0.998
K3W6R6_GLOUD	K3X8K7_GLOUD	K3W6R6	K3X8K7	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	Ribosomal_L28e domain-containing protein.	0.998
K3W6R6_GLOUD	K3XCB8_GLOUD	K3W6R6	K3XCB8	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999