STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K3WGI0_GLOUDUncharacterized protein. (72 aa)    
Predicted Functional Partners:
K3WQJ2_GLOUD
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.998
K3WG36_GLOUD
Uncharacterized protein.
    
 0.993
K3WKQ2_GLOUD
TFIIE beta domain-containing protein.
    
  0.991
K3WMY8_GLOUD
Uncharacterized protein.
    
 0.991
K3WPK9_GLOUD
HTH TFE/IIEalpha-type domain-containing protein.
    
  0.991
K3WWS7_GLOUD
General transcription factor IIH subunit.
    
 0.987
K3WFP6_GLOUD
Helicase ATP-binding domain-containing protein.
    
 0.980
K3WBE8_GLOUD
Uncharacterized protein.
    
 0.979
K3WVU4_GLOUD
RING-type domain-containing protein.
    
 0.975
K3X3H5_GLOUD
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.883
Your Current Organism:
Globisporangium ultimum
NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144
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