K3WHZ0_GLOUD protein (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K3WHZ0_GLOUD

Uncharacterized protein. (717 aa)

Predicted Functional Partners:

K3WXW0_GLOUD

0.524

K3XC73_GLOUD

0.524

K3WWP8_GLOUD

0.463

K3WWP9_GLOUD

0.463

K3X244_GLOUD

0.463

K3WKB5_GLOUD

0.461

K3WZ23_GLOUD

0.461

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3WHZ0_GLOUD	K3WKB5_GLOUD	K3WHZ0	K3WKB5	Uncharacterized protein.	Replication protein A subunit.	0.461
K3WHZ0_GLOUD	K3WWP8_GLOUD	K3WHZ0	K3WWP8	Uncharacterized protein.	RING-type domain-containing protein.	0.463
K3WHZ0_GLOUD	K3WWP9_GLOUD	K3WHZ0	K3WWP9	Uncharacterized protein.	RING-type domain-containing protein.	0.463
K3WHZ0_GLOUD	K3WXW0_GLOUD	K3WHZ0	K3WXW0	Uncharacterized protein.	Swi3 domain-containing protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.	0.524
K3WHZ0_GLOUD	K3WZ23_GLOUD	K3WHZ0	K3WZ23	Uncharacterized protein.	Uncharacterized protein.	0.461
K3WHZ0_GLOUD	K3X244_GLOUD	K3WHZ0	K3X244	Uncharacterized protein.	DUF4211 domain-containing protein.	0.463
K3WHZ0_GLOUD	K3XC73_GLOUD	K3WHZ0	K3XC73	Uncharacterized protein.	Uncharacterized protein.	0.524
K3WKB5_GLOUD	K3WHZ0_GLOUD	K3WKB5	K3WHZ0	Replication protein A subunit.	Uncharacterized protein.	0.461
K3WKB5_GLOUD	K3WWP8_GLOUD	K3WKB5	K3WWP8	Replication protein A subunit.	RING-type domain-containing protein.	0.644
K3WKB5_GLOUD	K3WWP9_GLOUD	K3WKB5	K3WWP9	Replication protein A subunit.	RING-type domain-containing protein.	0.644
K3WKB5_GLOUD	K3WXW0_GLOUD	K3WKB5	K3WXW0	Replication protein A subunit.	Swi3 domain-containing protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.	0.868
K3WKB5_GLOUD	K3X244_GLOUD	K3WKB5	K3X244	Replication protein A subunit.	DUF4211 domain-containing protein.	0.644
K3WKB5_GLOUD	K3XC73_GLOUD	K3WKB5	K3XC73	Replication protein A subunit.	Uncharacterized protein.	0.859
K3WWP8_GLOUD	K3WHZ0_GLOUD	K3WWP8	K3WHZ0	RING-type domain-containing protein.	Uncharacterized protein.	0.463
K3WWP8_GLOUD	K3WKB5_GLOUD	K3WWP8	K3WKB5	RING-type domain-containing protein.	Replication protein A subunit.	0.644
K3WWP8_GLOUD	K3WZ23_GLOUD	K3WWP8	K3WZ23	RING-type domain-containing protein.	Uncharacterized protein.	0.644
K3WWP9_GLOUD	K3WHZ0_GLOUD	K3WWP9	K3WHZ0	RING-type domain-containing protein.	Uncharacterized protein.	0.463
K3WWP9_GLOUD	K3WKB5_GLOUD	K3WWP9	K3WKB5	RING-type domain-containing protein.	Replication protein A subunit.	0.644
K3WWP9_GLOUD	K3WZ23_GLOUD	K3WWP9	K3WZ23	RING-type domain-containing protein.	Uncharacterized protein.	0.644
K3WXW0_GLOUD	K3WHZ0_GLOUD	K3WXW0	K3WHZ0	Swi3 domain-containing protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.	Uncharacterized protein.	0.524