K3WRY9_GLOUD protein (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K3WRY9_GLOUD

Uncharacterized protein. (371 aa)

Predicted Functional Partners:

K3WDN7_GLOUD

0.997

K3WB20_GLOUD

0.795

K3WM25_GLOUD

0.729

K3X2N1_GLOUD

0.721

K3WYZ6_GLOUD

0.718

K3WBP1_GLOUD

0.700

K3WYP1_GLOUD

0.700

K3WLE1_GLOUD

0.699

K3WSW8_GLOUD

0.697

K3X2D8_GLOUD

0.697

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3WB20_GLOUD	K3WDN7_GLOUD	K3WB20	K3WDN7	Uncharacterized protein.	Uncharacterized protein.	0.525
K3WB20_GLOUD	K3WRY9_GLOUD	K3WB20	K3WRY9	Uncharacterized protein.	Uncharacterized protein.	0.795
K3WBP1_GLOUD	K3WLE1_GLOUD	K3WBP1	K3WLE1	POP4 domain-containing protein.	Uncharacterized protein.	0.998
K3WBP1_GLOUD	K3WRY9_GLOUD	K3WBP1	K3WRY9	POP4 domain-containing protein.	Uncharacterized protein.	0.700
K3WBP1_GLOUD	K3WSW8_GLOUD	K3WBP1	K3WSW8	POP4 domain-containing protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.998
K3WBP1_GLOUD	K3X2D8_GLOUD	K3WBP1	K3X2D8	POP4 domain-containing protein.	Uncharacterized protein.	0.998
K3WDN7_GLOUD	K3WB20_GLOUD	K3WDN7	K3WB20	Uncharacterized protein.	Uncharacterized protein.	0.525
K3WDN7_GLOUD	K3WM25_GLOUD	K3WDN7	K3WM25	Uncharacterized protein.	Uncharacterized protein.	0.999
K3WDN7_GLOUD	K3WRY9_GLOUD	K3WDN7	K3WRY9	Uncharacterized protein.	Uncharacterized protein.	0.997
K3WDN7_GLOUD	K3WYP1_GLOUD	K3WDN7	K3WYP1	Uncharacterized protein.	ERCC4 domain-containing protein.	0.857
K3WDN7_GLOUD	K3WYZ6_GLOUD	K3WDN7	K3WYZ6	Uncharacterized protein.	Uncharacterized protein.	0.999
K3WDN7_GLOUD	K3X2N1_GLOUD	K3WDN7	K3X2N1	Uncharacterized protein.	Uncharacterized protein.	0.999
K3WLE1_GLOUD	K3WBP1_GLOUD	K3WLE1	K3WBP1	Uncharacterized protein.	POP4 domain-containing protein.	0.998
K3WLE1_GLOUD	K3WRY9_GLOUD	K3WLE1	K3WRY9	Uncharacterized protein.	Uncharacterized protein.	0.699
K3WLE1_GLOUD	K3WSW8_GLOUD	K3WLE1	K3WSW8	Uncharacterized protein.	Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.	0.999
K3WLE1_GLOUD	K3X2D8_GLOUD	K3WLE1	K3X2D8	Uncharacterized protein.	Uncharacterized protein.	0.998
K3WM25_GLOUD	K3WDN7_GLOUD	K3WM25	K3WDN7	Uncharacterized protein.	Uncharacterized protein.	0.999
K3WM25_GLOUD	K3WRY9_GLOUD	K3WM25	K3WRY9	Uncharacterized protein.	Uncharacterized protein.	0.729
K3WM25_GLOUD	K3WYP1_GLOUD	K3WM25	K3WYP1	Uncharacterized protein.	ERCC4 domain-containing protein.	0.975
K3WM25_GLOUD	K3WYZ6_GLOUD	K3WM25	K3WYZ6	Uncharacterized protein.	Uncharacterized protein.	0.948