K3WS09_GLOUD protein (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K3WS09_GLOUD

Uncharacterized protein. (108 aa)

Predicted Functional Partners:

K3WZU4_GLOUD

0.686

K3W8A5_GLOUD

0.674

K3W5Y8_GLOUD

0.611

K3WN30_GLOUD

0.611

K3WW71_GLOUD

0.611

K3WSF2_GLOUD

0.604

K3W7A0_GLOUD

0.593

K3X8E7_GLOUD

0.584

K3XAL3_GLOUD

0.532

K3WL72_GLOUD

0.529

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3W5Y8_GLOUD	K3WN30_GLOUD	K3W5Y8	K3WN30	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.975
K3W5Y8_GLOUD	K3WS09_GLOUD	K3W5Y8	K3WS09	Uncharacterized protein.	Uncharacterized protein.	0.611
K3W5Y8_GLOUD	K3WSF2_GLOUD	K3W5Y8	K3WSF2	Uncharacterized protein.	Uncharacterized protein.	0.677
K3W5Y8_GLOUD	K3WW71_GLOUD	K3W5Y8	K3WW71	Uncharacterized protein.	Uncharacterized protein.	0.975
K3W5Y8_GLOUD	K3WZU4_GLOUD	K3W5Y8	K3WZU4	Uncharacterized protein.	DHFR domain-containing protein.	0.514
K3W5Y8_GLOUD	K3XAL3_GLOUD	K3W5Y8	K3XAL3	Uncharacterized protein.	Uncharacterized protein.	0.498
K3W7A0_GLOUD	K3WS09_GLOUD	K3W7A0	K3WS09	FSH1 domain-containing protein.	Uncharacterized protein.	0.593
K3W7A0_GLOUD	K3WZU4_GLOUD	K3W7A0	K3WZU4	FSH1 domain-containing protein.	DHFR domain-containing protein.	0.983
K3W8A5_GLOUD	K3WS09_GLOUD	K3W8A5	K3WS09	PKS_AT domain-containing protein.	Uncharacterized protein.	0.674
K3W8A5_GLOUD	K3WZU4_GLOUD	K3W8A5	K3WZU4	PKS_AT domain-containing protein.	DHFR domain-containing protein.	0.521
K3W8A5_GLOUD	K3X8E7_GLOUD	K3W8A5	K3X8E7	PKS_AT domain-containing protein.	Uncharacterized protein.	0.413
K3WL72_GLOUD	K3WS09_GLOUD	K3WL72	K3WS09	Pex2_Pex12 domain-containing protein.	Uncharacterized protein.	0.529
K3WN30_GLOUD	K3W5Y8_GLOUD	K3WN30	K3W5Y8	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.975
K3WN30_GLOUD	K3WS09_GLOUD	K3WN30	K3WS09	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.611
K3WN30_GLOUD	K3WSF2_GLOUD	K3WN30	K3WSF2	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.677
K3WN30_GLOUD	K3WW71_GLOUD	K3WN30	K3WW71	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.975
K3WN30_GLOUD	K3WZU4_GLOUD	K3WN30	K3WZU4	Cytochrome b5 heme-binding domain-containing protein.	DHFR domain-containing protein.	0.514
K3WN30_GLOUD	K3XAL3_GLOUD	K3WN30	K3XAL3	Cytochrome b5 heme-binding domain-containing protein.	Uncharacterized protein.	0.498
K3WS09_GLOUD	K3W5Y8_GLOUD	K3WS09	K3W5Y8	Uncharacterized protein.	Uncharacterized protein.	0.611
K3WS09_GLOUD	K3W7A0_GLOUD	K3WS09	K3W7A0	Uncharacterized protein.	FSH1 domain-containing protein.	0.593