K3WW79_GLOUD protein (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K3WW79_GLOUD

Uncharacterized protein. (65 aa)

Predicted Functional Partners:

K3WB21_GLOUD

0.538

K3WIX4_GLOUD

0.538

K3X5B9_GLOUD

0.507

K3X7J1_GLOUD

0.467

K3X5P7_GLOUD

0.463

K3W4Z5_GLOUD

0.461

K3W6F6_GLOUD

0.461

K3W736_GLOUD

0.461

K3W819_GLOUD

0.461

K3W990_GLOUD

0.461

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3W4Z5_GLOUD	K3W6F6_GLOUD	K3W4Z5	K3W6F6	Uncharacterized protein.	Uncharacterized protein.	0.930
K3W4Z5_GLOUD	K3W736_GLOUD	K3W4Z5	K3W736	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.944
K3W4Z5_GLOUD	K3W819_GLOUD	K3W4Z5	K3W819	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.914
K3W4Z5_GLOUD	K3W990_GLOUD	K3W4Z5	K3W990	Uncharacterized protein.	Uncharacterized protein.	0.925
K3W4Z5_GLOUD	K3WW79_GLOUD	K3W4Z5	K3WW79	Uncharacterized protein.	Uncharacterized protein.	0.461
K3W4Z5_GLOUD	K3X5P7_GLOUD	K3W4Z5	K3X5P7	Uncharacterized protein.	Uncharacterized protein.	0.983
K3W4Z5_GLOUD	K3X7J1_GLOUD	K3W4Z5	K3X7J1	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein.	0.981
K3W6F6_GLOUD	K3W4Z5_GLOUD	K3W6F6	K3W4Z5	Uncharacterized protein.	Uncharacterized protein.	0.930
K3W6F6_GLOUD	K3W736_GLOUD	K3W6F6	K3W736	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	0.998
K3W6F6_GLOUD	K3W819_GLOUD	K3W6F6	K3W819	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.908
K3W6F6_GLOUD	K3W990_GLOUD	K3W6F6	K3W990	Uncharacterized protein.	Uncharacterized protein.	0.988
K3W6F6_GLOUD	K3WB21_GLOUD	K3W6F6	K3WB21	Uncharacterized protein.	AP complex subunit beta; Belongs to the adaptor complexes large subunit family.	0.461
K3W6F6_GLOUD	K3WIX4_GLOUD	K3W6F6	K3WIX4	Uncharacterized protein.	AP complex subunit beta.	0.461
K3W6F6_GLOUD	K3WW79_GLOUD	K3W6F6	K3WW79	Uncharacterized protein.	Uncharacterized protein.	0.461
K3W6F6_GLOUD	K3X5P7_GLOUD	K3W6F6	K3X5P7	Uncharacterized protein.	Uncharacterized protein.	0.998
K3W6F6_GLOUD	K3X7J1_GLOUD	K3W6F6	K3X7J1	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein.	0.997
K3W736_GLOUD	K3W4Z5_GLOUD	K3W736	K3W4Z5	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Uncharacterized protein.	0.944
K3W736_GLOUD	K3W6F6_GLOUD	K3W736	K3W6F6	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Uncharacterized protein.	0.998
K3W736_GLOUD	K3W819_GLOUD	K3W736	K3W819	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Uncharacterized protein; Belongs to the complex I LYR family.	0.910
K3W736_GLOUD	K3W990_GLOUD	K3W736	K3W990	Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.	Uncharacterized protein.	0.992