K3X719_GLOUD protein (Globisporangium ultimum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

K3X719_GLOUD

RNase H domain-containing protein. (167 aa)

Predicted Functional Partners:

K3WZU4_GLOUD

0.571

K3WHE1_GLOUD

0.453

K3WD14_GLOUD

0.432

K3X1E0_GLOUD

0.422

K3WMA7_GLOUD

0.415

K3WMP3_GLOUD

0.415

K3WZ38_GLOUD

0.415

K3X4V6_GLOUD

0.411

K3XCE0_GLOUD

0.411

K3WII4_GLOUD

0.409

Your Current Organism:

Globisporangium ultimum

NCBI taxonomy Id: 431595
Other names: G. ultimum DAOM BR144, Globisporangium ultimum DAOM BR144

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
K3WD14_GLOUD	K3WMA7_GLOUD	K3WD14	K3WMA7	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Uncharacterized protein.	0.856
K3WD14_GLOUD	K3WMP3_GLOUD	K3WD14	K3WMP3	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.856
K3WD14_GLOUD	K3WZ38_GLOUD	K3WD14	K3WZ38	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.856
K3WD14_GLOUD	K3WZU4_GLOUD	K3WD14	K3WZU4	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	DHFR domain-containing protein.	0.954
K3WD14_GLOUD	K3X4V6_GLOUD	K3WD14	K3X4V6	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	POLAc domain-containing protein.	0.667
K3WD14_GLOUD	K3X719_GLOUD	K3WD14	K3X719	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	RNase H domain-containing protein.	0.432
K3WD14_GLOUD	K3XCE0_GLOUD	K3WD14	K3XCE0	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	53EXOc domain-containing protein.	0.667
K3WHE1_GLOUD	K3WZU4_GLOUD	K3WHE1	K3WZU4	Uncharacterized protein.	DHFR domain-containing protein.	0.420
K3WHE1_GLOUD	K3X719_GLOUD	K3WHE1	K3X719	Uncharacterized protein.	RNase H domain-containing protein.	0.453
K3WII4_GLOUD	K3WMA7_GLOUD	K3WII4	K3WMA7	Thymidylate_kin domain-containing protein.	Uncharacterized protein.	0.414
K3WII4_GLOUD	K3WMP3_GLOUD	K3WII4	K3WMP3	Thymidylate_kin domain-containing protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.414
K3WII4_GLOUD	K3WZ38_GLOUD	K3WII4	K3WZ38	Thymidylate_kin domain-containing protein.	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	0.414
K3WII4_GLOUD	K3WZU4_GLOUD	K3WII4	K3WZU4	Thymidylate_kin domain-containing protein.	DHFR domain-containing protein.	0.952
K3WII4_GLOUD	K3X719_GLOUD	K3WII4	K3X719	Thymidylate_kin domain-containing protein.	RNase H domain-containing protein.	0.409
K3WMA7_GLOUD	K3WD14_GLOUD	K3WMA7	K3WD14	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.856
K3WMA7_GLOUD	K3WII4_GLOUD	K3WMA7	K3WII4	Uncharacterized protein.	Thymidylate_kin domain-containing protein.	0.414
K3WMA7_GLOUD	K3WZU4_GLOUD	K3WMA7	K3WZU4	Uncharacterized protein.	DHFR domain-containing protein.	0.821
K3WMA7_GLOUD	K3X719_GLOUD	K3WMA7	K3X719	Uncharacterized protein.	RNase H domain-containing protein.	0.415
K3WMP3_GLOUD	K3WD14_GLOUD	K3WMP3	K3WD14	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.856
K3WMP3_GLOUD	K3WII4_GLOUD	K3WMP3	K3WII4	Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.	Thymidylate_kin domain-containing protein.	0.414